卢东岳,王兴芬,李莉.基于流调数据的患者关系知识图谱构建[J]. 微电子学与计算机,2023,40(3):46-55. doi: 10.19304/J.ISSN1000-7180.2022.0317
引用本文: 卢东岳,王兴芬,李莉.基于流调数据的患者关系知识图谱构建[J]. 微电子学与计算机,2023,40(3):46-55. doi: 10.19304/J.ISSN1000-7180.2022.0317
LU D Y,WANG X F,LI L. Knowledge graph construction of patient relationship based on epidemiological investigation data[J]. Microelectronics & Computer,2023,40(3):46-55. doi: 10.19304/J.ISSN1000-7180.2022.0317
Citation: LU D Y,WANG X F,LI L. Knowledge graph construction of patient relationship based on epidemiological investigation data[J]. Microelectronics & Computer,2023,40(3):46-55. doi: 10.19304/J.ISSN1000-7180.2022.0317

基于流调数据的患者关系知识图谱构建

Knowledge graph construction of patient relationship based on epidemiological investigation data

  • 摘要: 随着新冠感染患者数量的增多,产生了大量与之相关的流调数据. 以流调数据为基础,通过分析患者间的语义关联特征可以在个体层面表达疾病的传播过程,深入探讨患者染病的特征分布、患者之间的传播路径等问题. 基于此,研究以患者为中心并兼顾语义关联特征,借助知识图谱技术完成对患者流调数据的建模. 首先在解析流调数据的基础上定义患者语义关系,据此设计患者关系图谱的模式层.然后,通过识别患者、地点实体,抽取“患者-关系-患者”及“患者-居住-地点”三元组等任务完成数据层构建.最后,利用Neo4j图数据库实现患者关系图谱的可视化并加以分析. 结果表明,通过对超级传播源分析和传播路径追溯等层面进行验证,患者关系图谱可以挖掘患者的内在关联、有效整合患者语义关系,表达疾病在患者间的传播过程.

     

    Abstract: As the number of patients infected with the novel coronavirus increases, a large amount of epidemiological investigation data associated with them has been generated. Based on the data, the semantic association features among patients can be analyzed to express the disease transmission process at the individual level and to explore the distribution of patient characteristics and the transmission paths among patients. Firstly, the semantic relationship of patients is defined based on the analysis of flow modulation data, and the pattern layer of the patient relationship graph is designed accordingly. Then, the data layer is constructed by identifying patients and place entities and extracting "patient-relation-patient" and "patient-residence-place" triplets. Finally, the Neo4j graph database is used to visualize and analyze the patient relationship graph. The results show that the patient relationship graph can explore the intrinsic association of patients, effectively integrate the semantic relationship of patients, and express the process of disease transmission among patients by verifying the super spreader analysis and route of transmission.

     

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